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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9941856 chr21:43989391 T/C TLN1 chr9:35696945-35732392:- 0.21 5.89 7.25E-9 Box Plot
THCA rs994691 chr6:27047713 A/T ZNF322B chr9:99957633-99961910:- -0.47 -8.31 9.78E-16 Box Plot
THCA rs9948080 chr18:25071969 A/C GPRASP1 chrX:101906294-101914011:+ 0.39 5.94 5.43E-9 Box Plot
THCA rs9953614 chr18:57791433 T/C C7orf53 chr7:112120908-112130935:+ 0.54 5.95 5.3E-9 Box Plot
THCA rs996247 chr6:27193095 C/T ZNF322B chr9:99957633-99961910:- -0.39 -6.27 7.98E-10 Box Plot
THCA rs9969437 chr8:3256225 T/G CSMD1 chr8:2792875-4852494:- -0.5 -10.29 1.41E-22 Box Plot
THCA rs9969438 chr8:3256228 T/C CSMD1 chr8:2792875-4852494:- -0.5 -10.29 1.41E-22 Box Plot
THCA rs9969441 chr8:3256474 T/C CSMD1 chr8:2792875-4852494:- -0.5 -10.34 9.49E-23 Box Plot
THCA rs9969528 chr8:3259017 A/C CSMD1 chr8:2792875-4852494:- -0.5 -9.67 2.63E-20 Box Plot
THCA rs9969535 chr8:3256281 C/G CSMD1 chr8:2792875-4852494:- 0.51 10.32 1.11E-22 Box Plot
THCA rs9969537 chr8:3256349 G/A CSMD1 chr8:2792875-4852494:- -0.5 -10.29 1.41E-22 Box Plot
THCA rs9969557 chr8:3258715 C/T CSMD1 chr8:2792875-4852494:- 0.51 9.85 5.57E-21 Box Plot
THCA rs9969619 chr8:3258490 C/T CSMD1 chr8:2792875-4852494:- -0.5 -10.18 3.66E-22 Box Plot
THCA rs9969646 chr8:3258650 G/A CSMD1 chr8:2792875-4852494:- -0.5 -9.81 7.81E-21 Box Plot
THCA rs9969657 chr8:10515278 A/G SGK223 chr8:8175258-8244008:- -0.3 -5.96 4.89E-9 Box Plot